Display Control & Help
Load X-Ray Structure
Select X-ray Structure
HIV protease with Xv638
Rhodopsin with Retinol
CDK2 with Staurosporine
p38 with Sb203580
DHFR with Methotrexate
Thrombin with inhibitor
Estrogen rec. w. Raloxifene
HIV-RT with Tnk-6123
Gyrase-B with Novobiocin
Ribonuclease-T1 substrate
Center X-ray structure
Center on Ligand
Center on Protein
Display Controls
Display Shadows
Display Antialiased
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Gradient Colour Top
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Key
Action
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c
Centre
d
Distance between 2 selected atoms
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r
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Protein
Protein
Atom Display
Atom Display Style
line width 1
line width 2
line width 3
sticks
cylinders
spheres
Colour Protein
By atoms (C=Green)
By atoms (C=Grey)
By atoms (C=Black)
By atoms (C=White)
White
Black
Grey
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Solid surface
Adjust Surface Size
5Å around Ligand
7Å around Ligand
10Å around Ligand
15Å around Ligand
Around Protein
Colour Surface
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Transparancy Surface
100%
90%
80%
70%
60%
50%
40%
30%
20%
10%
Texture Surface
Rainbow
Pale
RedBlue
BlueBrown
BlueGreen
Mesh surface
Adjust Mesh Size
5Å around Ligand
7Å around Ligand
10Å around Ligand
15Å around Ligand
Around Protein
Colour Mesh
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Cartoon Display
Colour Cartoon
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Transparancy Cartoon
100%
90%
80%
70%
60%
50%
40%
30%
20%
10%
Texture & Rendering Cartoon
Secondary Structure
Secondary Structure All Tube
Rainbow
Rainbow All Tube
Ligand
Ligand
Atom Display
Atom Display Style
line width 1
line width 2
line width 3
sticks
cylinders
spheres
Colour Ligand
By atoms (C=Green)
By atoms (C=Grey)
By atoms (C=Black)
By atoms (C=White)
White
Black
Grey
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Solid Surface
Colour Surface
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Transparancy Surface
100%
90%
80%
70%
60%
50%
40%
30%
20%
10%
Texture Surface
Rainbow
Pale
RedBlue
BlueBrown
BlueGreen
Mesh surface
Colour Mesh
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Ligand interactions
Hydrogen Bonds
Contacts Residues
Waters
Water
Atom Display
Atom Display Style
line width 1
line width 2
line width 3
sticks
cylinders
spheres
Solid Surface
Colour Surface
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Transparancy Surface
100%
90%
80%
70%
60%
50%
40%
30%
20%
10%
Mesh surface
Colour Mesh
White
Red
Green
Blue
Orange
Cyan
Magenta
Brown
Yellow
Purple
Display interactions
Hydrogen Bonds
Contacts Residues
© 2005
Anders Poulsen
www.colours.dk
